Fitness data for PP_4010 in Pseudomonas putida KT2440

DNA replication inhibitor
SEED: Cold shock protein CspD
KEGG: cold shock protein (beta-ribbon, CspA family)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
nitrogen source 2,6-diaminopimelic (N) -1.7 -2.7 compare
phage P. putida Sci small MOI 0.1 -1.7 -1.4 compare
temperature shift Temperature shift 30_to_25; with MOPS -1.6 -2.9 compare
carbon source carbon source 4-vinylphenol 0.1 mM -1.6 -3.7 compare
carbon source 1,4-Butanediol (C) -1.6 -5.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.5 -2.3 compare
pH Growth at pH8 and (C) D-Glucose -1.5 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.5 -2.5 compare
carbon source 4-Hydroxyvalerate (C) (40mM) -1.4 -2.8 compare
carbon source 4-Hydroxyvalerate (C) (40mM) -1.4 -3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.3 -2.7 compare
carbon source Valerolactone (C) -1.3 -2.8 compare
carbon source 1,4-Butanediol (C) -1.2 -3.2 compare
nitrogen source nitrate (N) -1.2 -1.7 compare
stress R2A with Fusaric 240 ug/mL -1.1 -3.8 compare
carbon source Ethyl decanoate (C) -1.1 -2.8 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -1.1 -2.8 compare
micoeukaryotes C.elegans, mixed culture-2 +1.3 +7.5 compare
micoeukaryotes C.elegans, mixed culture-1 +1.3 +6.4 compare
pH Valerolactone (C) pH 6.5 +2.8 +2.0 compare