Fitness data for PP_3989 in Pseudomonas putida KT2440

DNA-cytosine methyltransferase
SEED: DNA-cytosine methyltransferase (EC 2.1.1.37)
KEGG: DNA (cytosine-5-)-methyltransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
phage PUT 8 MOI 1 -2.5 -2.3 compare
carbon source Valeric (C) -2.1 -2.7 compare
pH Growth at pH6 and (C) D-Glucose -2.0 -2.3 compare
carbon source 1,3-Butandiol (C) -1.6 -2.2 compare
pH Growth at pH7 and (C) D-Glucose -1.4 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.3 -2.2 compare
nitrogen source NAG (N); with MOPS -1.3 -1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.3 -2.4 compare
carbon source pyruvate (C) -1.3 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.2 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -2.6 compare
phage P. put South MOI 0.1 -1.1 -2.5 compare
pH Growth at pH7 and (C) D-Glucose -1.1 -1.4 compare
pH Growth at pH6 and (C) Trisodium citrate -1.0 -2.0 compare
temperature shift Temperature shift 10_to_30 +1.1 +3.2 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +1.1 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +3.0 compare
carbon source D-Glucose (C) +1.1 +2.7 compare
temperature Growth at 30C; with MOPS +1.1 +2.9 compare
no stress control Growth with no stress +1.2 +2.6 compare