Fitness data for PP_3987 in Pseudomonas putida KT2440

Site-specific recombinase, phage integrase family
SEED: site-specific recombinase, phage integrase family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)

group	condition	fitness	t score
nitrogen source	NAG (N); with MOPS	-0.6	-2.0	compare
pH	Growth at pH6 and (C) Trisodium citrate	-0.5	-2.4	compare
temperature shift	Temperature shift 30_to_21; with MOPS	-0.5	-2.2	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.5	-2.1	compare
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-0.4	-2.5	compare
nitrogen source	nitrogen source nitrite 1mM	-0.4	-1.9	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.4	-1.7	compare
nitrogen source	Ammonium chloride and TNT (N)	-0.4	-2.2	compare
pH	Valerolactone (C) pH 6.5	-0.4	-1.8	compare
temperature shift	Temperature shift 10_to_30; with MOPS	-0.4	-1.8	compare
carbon source	3-Methyl-2-Oxobutanoic Acid (C)	-0.4	-2.3	compare
carbon source	Valeric (C)	-0.4	-1.3	compare
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.4	-2.0	compare
nitrogen source	2,6-diaminopimelic (N)	+0.4	+1.5	compare
carbon source	Mucic (C)	+0.4	+2.8	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	+0.4	+1.7	compare
nitrogen source	nitrogen source nitrite 0.5mM	+0.4	+2.0	compare
carbon source	3-methyl-1-butanol 0.1 vol% (C)	+0.4	+2.4	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.5	+2.4	compare
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.6	+2.5	compare