Fitness data for PP_3976 in Pseudomonas putida KT2440

Hydrolase, isochorismatase family
SEED: hydrolase, isochorismatase family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
phage PUT 8 MOI 1 -0.3 -1.8 compare
temperature Growth at 30C; with MOPS -0.3 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3 -1.6 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.3 -1.6 compare
phage P. putida Sci Big MOI 0.1 -0.2 -1.4 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.2 -1.6 compare
pH Growth at pH7 and (C) Trisodium citrate -0.2 -1.7 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.2 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.2 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.2 -1.6 compare
carbon source Trisodium citrate (C) -0.2 -1.2 compare
carbon source Valerolactone (C) +0.2 +1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.2 +1.2 compare
stress R2A with Fusaric 480 ug/mL +0.3 +2.0 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.3 +1.7 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.3 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.3 +1.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +2.4 compare