Fitness data for PP_3971 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00961372: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.7)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -5.0 -1.3 compare
carbon source D-Glucose (C) -4.1 -1.4 compare
carbon source ferulate (C); with MOPS -3.9 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -2.7 -2.1 compare
stress Growth with Chloride 500 mM; with MOPS -2.7 -2.0 compare
carbon source Valerolactone (C) -2.7 -1.7 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO. -2.6 -1.8 compare
pH Growth at pH8 and (C) Trisodium citrate -2.4 -1.8 compare
temperature shift Temperature shift 30_to_25; with MOPS -2.3 -1.6 compare
nitrogen source D-2-Aminobutyric (N) -2.1 -1.0 compare
carbon source ferulate (C); with MOPS -1.9 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.8 -1.6 compare
nitrogen source nitrogen source nitrite 0.5mM -1.8 -0.9 compare
pH Growth at pH9 and (C) Trisodium citrate -1.7 -1.6 compare
carbon source 1,3-Butandiol (C) -1.7 -1.3 compare
pH pH 7 +1.7 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +1.9 +4.1 compare
stress R2A with Fusaric 480 ug/mL +1.9 +4.1 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +2.0 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +2.2 +1.5 compare