Fitness data for PP_3959 in Pseudomonas putida KT2440

Voltage-gated chloride channel family protein
SEED: Chloride channel protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.9 compare
nitrogen source nitrogen source nitrite 1mM -0.6 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -1.9 compare
nitrogen source Ammonium chloride (N) -0.5 -2.3 compare
toxin pUC18_phdP1_pSU18T_docP1 -0.5 -2.8 compare
temperature Growth at 25C -0.5 -1.5 compare
carbon source ferulate (C); with MOPS -0.5 -1.9 compare
pH Valerolactone (C) pH 6.5 -0.5 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4 -2.2 compare
temperature shift Temperature shift 30_to_21 +0.4 +2.4 compare
nitrogen source Propandiamine (N) +0.4 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.7 compare
carbon source Myristic (C) +0.5 +2.0 compare
nitrogen source 2,6-diaminopimelic (N) +0.5 +2.4 compare
nitrogen source Ammonium chloride (N) +0.5 +2.5 compare
nitrogen source 2,6-diaminopimelic (N) +0.6 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.8 compare