Fitness data for PP_3956 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: DUF1850 domain-containing protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Myristic (C) -0.8 -1.6 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay -0.7 -2.7 compare
pH Growth at pH6 and (C) D-Glucose -0.6 -1.6 compare
pH Growth at pH9 and (C) Trisodium citrate -0.6 -2.7 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.6 -1.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -1.2 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.5 -2.2 compare
carbon source Crotonic (C) -0.5 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.6 compare
nitrogen source TNT (N) +0.5 +2.5 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +1.4 compare
carbon source ferulate (C); with MOPS +0.5 +1.7 compare
nitrogen source Propiolactam (N) +0.5 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.2 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +2.6 compare
pH pH 8 +0.6 +1.7 compare
pH Growth at pH6 and (C) Trisodium citrate +0.6 +2.3 compare
nitrogen source nitrogen source nitrite 1mM +0.6 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.2 compare