Fitness data for PP_3954 in Pseudomonas putida KT2440

periplasmic binding subunit of unknown solute
SEED: TRAP transporter solute receptor, unknown substrate 1

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -2.7 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.4 -2.2 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.4 -2.5 compare
carbon source carbon source D-Glucose 55.5 mM -0.4 -1.8 compare
phage P. putida PUT 7 MOI 1 -0.4 -1.8 compare
carbon source ferulate (C); with MOPS -0.3 -1.8 compare
phage P. putida Missley MOI 0.1 -0.3 -1.6 compare
carbon source L-Leucine (C) -0.3 -1.6 compare
no stress control Growth with no stress -0.3 -1.7 compare
stress R2A with Fusaric 240 ug/mL -0.3 -2.0 compare
phage P. putida Sci small MOI 0.1 -0.3 -1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.3 -1.8 compare
carbon source L-Proline (C) -0.3 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.6 compare
nitrogen source Urea (N); with MOPS +0.3 +1.7 compare
carbon source Myristic (C) +0.3 +1.6 compare
nitrogen source Propiolactam (N) +0.3 +1.8 compare
carbon source Valeric (C) +0.3 +1.6 compare