Fitness data for PP_3949 in Pseudomonas putida KT2440

HTH-type transcriptional repressor NicS

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -0.6 -2.2 compare
pH pH 4 -0.4 -2.4 compare
nitrogen source 2,6-diaminopimelic (N) -0.4 -1.7 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.4 -2.2 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.7 compare
carbon source carbon source Bisabolene 48.9 mM -0.3 -2.2 compare
pH pH 8 -0.3 -1.8 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.3 -2.4 compare
pH pH 9 -0.3 -1.6 compare
phage PUT 8 MOI 1 -0.3 -1.6 compare
phage P. putida PUT 7 MOI 1 -0.3 -1.5 compare
phage P. putida Sci Big MOI 0.1 -0.3 -1.3 compare
phage P. putida Missley MOI 0.1 -0.3 -1.3 compare
pH Growth at pH6 and (C) D-Glucose -0.3 -1.3 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.3 -1.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.3 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +2.1 compare
temperature shift Temperature shift 30_to_25 +0.4 +2.7 compare