Fitness data for PP_3948 in Pseudomonas putida KT2440

nicotinate dehydrogenase subunit B (EC 1.17.2.1) (from data)
Original annotation: nicotinate dehydrogenase subunit B
SEED: Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)

group	condition	fitness	t score
nitrogen source	Nicotinic Acid (N)	-1.4	-10.7	compare
nitrogen source	Nicotinic Acid (N)	-1.3	-10.1	compare
phage	P. putida Sci small MOI 0.1	-0.8	-3.1	compare
pH	Growth at pH6 and (C) D-Glucose	-0.5	-1.9	compare
phage	P. putida Sci Big MOI 0.1	-0.5	-2.1	compare
carbon source	ferulate (C); with MOPS	-0.4	-1.8	compare
pH	Growth at pH6 and (C) Trisodium citrate	-0.3	-1.8	compare
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM	-0.3	-2.2	compare
nitrogen source	NAG (N); with MOPS	-0.3	-1.4	compare
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.3	-1.5	compare
r2a control	R2A control	-0.2	-1.9	compare
pH	Growth at pH8 and (C) D-Glucose	+0.3	+1.4	compare
carbon source	1,3-Butandiol (C)	+0.3	+1.5	compare
nitrogen source	nitrogen source nitrite 1mM	+0.3	+1.6	compare
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3	+1.3	compare
pH	Growth at pH7 and (C) D-Glucose	+0.3	+1.7	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	+0.3	+1.9	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.3	+1.9	compare
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4	+2.2	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5	+2.8	compare