Fitness data for PP_3947 in Pseudomonas putida KT2440

nicotinate dehydrogenase subunit A
SEED: Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
nitrogen source 2,6-diaminopimelic (N) -1.7 -2.0 compare
nitrogen source Nicotinic Acid (N) -1.3 -4.6 compare
nitrogen source Nicotinic Acid (N) -1.3 -6.5 compare
carbon source Valerolactone (C) -1.3 -2.3 compare
nitrogen source D-2-Aminobutyric (N) -1.0 -2.3 compare
carbon source acetate (C) -1.0 -1.8 compare
phage P. putida Missley MOI 0.1 -1.0 -2.5 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -0.9 -2.4 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.8 -2.6 compare
pH Growth at pH6 and (C) Trisodium citrate -0.8 -2.6 compare
nitrogen source nitrogen source nitrate 20mM -0.8 -2.1 compare
stress MOPS minimal media_Glucose20mM with Chloride 200 mM -0.8 -3.0 compare
nitrogen source nitrate (N) -0.8 -2.2 compare
carbon source 1,3-Hexanediol (C) -0.8 -3.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -1.4 compare
temperature shift Temperature shift 10_to_30 -0.7 -2.1 compare
carbon source butyrate (C) -0.7 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.7 compare
phage P. putida Sci small MOI 0.1 +0.8 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +3.9 compare