Fitness data for PP_3919 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.8 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.0 -2.2 compare
temperature Growth at 25C -2.0 -2.1 compare
temperature Growth at 30C; with MOPS -1.9 -3.2 compare
temperature Growth at 25C; with MOPS -1.8 -2.2 compare
nitrogen source NAG (N); with MOPS -1.6 -1.2 compare
phage P. putida Sci small MOI 0.1 -1.5 -0.9 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -1.5 -2.3 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -1.4 -3.1 compare
carbon source L-Lysine (C) -1.4 -2.7 compare
nitrogen source nitrogen source Ammonium chloride 20mM -1.4 -3.0 compare
phage P. putida PUT 7 MOI 1 -1.3 -2.8 compare
nitrogen source nitrogen source nitrite 1mM -1.3 -1.5 compare
stress Growth with Chloride 500 mM; with MOPS -1.2 -3.0 compare
pH Valerolactone (C) pH 6.5 -1.2 -2.1 compare
carbon source Decanoic (C) -1.2 -3.0 compare
carbon source D-Glucose (C); with MOPS -1.1 -1.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.5 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +1.6 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +2.0 +1.7 compare