Fitness data for PP_3915 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source ferulate (C); with MOPS -1.2 -2.6 compare
nitrogen source no extra (N); with MOPS -0.9 -3.5 compare
stress Growth with Chloride 200 mM; with MOPS -0.8 -1.9 compare
temperature shift Temperature shift 30_to_34; with MOPS -0.8 -2.0 compare
pH pH 6 -0.8 -2.2 compare
pH Growth at pH9 and (C) Trisodium citrate -0.7 -2.7 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.7 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7 -1.8 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.6 -1.2 compare
nitrogen source nitrogen source nitrite 1mM -0.6 -1.4 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -0.6 -1.6 compare
carbon source 4-Hydroxybenzoic Acid (C) -0.6 -2.5 compare
temperature shift Temperature shift 30_to_4 -0.6 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.6 +2.3 compare
carbon source 3-Hydroxyhexanoic (C) +0.6 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.6 +2.5 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay +0.7 +2.2 compare
temperature shift Temperature shift 30_to_25 +0.7 +3.4 compare
nitrogen source 2,6-diaminopimelic (N) +1.0 +2.4 compare