Fitness data for PP_3912 in Pseudomonas putida KT2440

DNA-cytosine methyltransferase
SEED: DNA-cytosine methyltransferase (EC 2.1.1.37)
KEGG: DNA (cytosine-5-)-methyltransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.5 -2.1 compare
temperature Growth at 25C -0.5 -2.4 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -1.7 compare
nitrogen source NAG (N) -0.4 -2.3 compare
nitrogen source nitrite (N) -0.4 -2.3 compare
stress Growth with Chloride 500 mM -0.4 -1.8 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -0.4 -2.1 compare
phage P. putida Sci small MOI 0.1 +0.4 +1.2 compare
carbon source Delta-Decalactone (C) +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.4 compare
pH pH 8 +0.4 +1.9 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.6 compare
pH pH 7 +0.5 +2.0 compare
phage P. putida Sci Big MOI 0.1 +0.5 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.6 compare
carbon source Delta-Nonalactone (C) +0.7 +2.1 compare