Fitness data for PP_3906 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
nitrogen source D-2-Aminobutyric (N) -3.5 -1.9 compare
nitrogen source Urea (N) -1.4 -1.8 compare
carbon source Tween 20 (C) -1.4 -2.4 compare
temperature shift Temperature shift 30_to_25; with MOPS -1.4 -2.3 compare
pH Growth at pH6 and (C) D-Glucose -1.3 -1.3 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -1.3 -1.4 compare
temperature shift Temperature shift 30_to_25; with MOPS -1.2 -1.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.2 -1.3 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.1 -2.6 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -1.1 -1.9 compare
pH Growth at pH7 and (C) D-Glucose -1.0 -0.6 compare
nitrogen source nitrogen source nitrite 1mM -0.9 -1.1 compare
pH Growth at pH7 and (C) D-Glucose -0.9 -0.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +1.3 compare
temperature Growth at 30C +0.9 +2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +1.0 +3.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +1.6 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant +1.1 +1.3 compare
carbon source ferulate (C); with MOPS +1.1 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.6 +1.7 compare