Fitness data for PP_3889 in Pseudomonas putida KT2440

putative Phage integrase
SEED: phage integrase, putative

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.7 -3.1 compare
carbon source Tween 20 (C) -0.6 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.9 compare
pH Valerolactone (C) pH 6.5 -0.4 -2.2 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.4 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.4 -2.4 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -2.3 compare
carbon source D-Glucose (C) -0.4 -1.5 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.3 compare
pH Growth at pH6 and (C) Trisodium citrate +0.4 +1.7 compare
temperature shift Temperature shift 30_to_10; with MOPS +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.9 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.6 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.5 +2.6 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.5 +2.3 compare
stress Formaldehyde 0.03125 vol% +0.8 +4.2 compare