Fitness data for PP_3876 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -2.2 -1.7 compare
carbon source 1,3-Butandiol (C) -1.8 -2.3 compare
pH Growth at pH6 and (C) D-Glucose -1.7 -1.0 compare
temperature shift Temperature shift 10_to_25; with MOPS -1.6 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.6 -1.1 compare
no stress control Growth with no stress -1.6 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -1.3 compare
carbon source Lauric (C) -1.5 -2.6 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -1.5 -1.1 compare
nitrogen source nitrate (N) -1.4 -1.2 compare
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -1.4 -1.5 compare
stress MOPS minimal media_Glucose20mM with Chloride 200 mM -1.4 -1.1 compare
nitrogen source no extra (N); with MOPS -1.4 -2.3 compare
pH D-Glucose (C) pH 6.5 +1.3 +1.7 compare
pH Valerolactone (C) pH 6.5 +1.3 +1.5 compare
pH Growth at pH7 and (C) Trisodium citrate +1.3 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.3 +3.5 compare
pH Valerolactone (C) pH 6.5 +1.4 +2.3 compare
pH D-Glucose (C) pH 6.5 +1.4 +1.8 compare
nitrogen source 2,6-diaminopimelic (N) +1.4 +1.7 compare