Fitness data for PP_3874 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
pH Growth at pH7 and (C) D-Glucose -6.5 -2.6 compare
carbon source D-Glucose (C) -2.9 -2.1 compare
nitrogen source D-2-Aminobutyric (N) -2.3 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -2.1 -2.1 compare
pH Valerolactone (C) pH 6.5 -2.0 -2.0 compare
carbon source DL-3-Hydroxyisobutyric (C) -2.0 -2.4 compare
nitrogen source Urea (N) -1.4 -1.4 compare
pH pH 8 -1.2 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.2 -2.4 compare
stress R2A with Fusaric 240 ug/mL -1.1 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.1 -2.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.1 +4.6 compare
nitrogen source NAG (N) +1.1 +4.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.1 +1.7 compare
temperature shift Temperature shift 10_to_30 +1.2 +3.3 compare
pH Growth at pH6 and (C) Trisodium citrate +1.2 +3.7 compare
phage P. put South MOI 10 +1.2 +2.9 compare
temperature shift Temperature shift 10_to_25; with MOPS +1.3 +4.1 compare
no stress control Growth with no stress +1.3 +3.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +3.6 +1.5 compare