Fitness data for PP_3863 in Pseudomonas putida KT2440

putative Phage tail protein
SEED: FIG003269: Prophage tail protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
phage P. putida Sci Big MOI 0.1 -1.7 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.1 -1.7 compare
carbon source D-Glucose (C) -0.9 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.9 -1.5 compare
pH Growth at pH6 and (C) D-Glucose -0.9 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -2.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.8 -1.4 compare
carbon source Valeric (C) -0.8 -1.3 compare
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -0.8 -2.4 compare
time series Timeseries; MIN condition; Bioreplicate 1; Time 7hrs; Measurement -0.8 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.8 -2.0 compare
phage P. putida Sci small MOI 0.1 +0.8 +2.1 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +0.8 +2.4 compare
phage P. putida PUT 7 MOI 1 +0.8 +2.4 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.8 +3.5 compare
pH pH 9 +0.9 +2.3 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.9 +2.8 compare
carbon source acetate (C) +0.9 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +2.3 compare