Fitness data for PP_3856 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
temperature Growth at 25C -0.6 -2.5 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.6 -2.1 compare
carbon source D-Glucose (C); with MOPS -0.5 -2.5 compare
nitrogen source nitrate (N) -0.5 -2.4 compare
pH Growth at pH8 and (C) D-Glucose -0.5 -2.0 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.5 -2.4 compare
nitrogen source Urea (N) -0.5 -2.2 compare
temperature Growth at 30C; with MOPS -0.4 -2.1 compare
temperature shift Temperature shift 30_to_25 -0.4 -2.3 compare
no stress control Growth with no stress -0.4 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.0 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.4 -1.9 compare
carbon source D-Glucose (C) -0.4 -1.6 compare
nitrogen source Ammonium chloride (N) -0.4 -1.7 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.4 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.7 +3.6 compare
nitrogen source D-2-Aminobutyric (N) +0.8 +3.6 compare