Fitness data for PP_3850 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
temperature shift Temperature shift 30_to_25; with MOPS -1.7 -3.4 compare
temperature shift Temperature shift 30_to_21; with MOPS -1.5 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.3 -2.3 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -1.1 -2.4 compare
carbon source Vanillin (C) -1.0 -2.7 compare
carbon source p-Coumaric (C) -1.0 -4.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.0 -2.0 compare
carbon source D-Glucose (C); with MOPS -1.0 -2.8 compare
stress R2A with Fusaric 240 ug/mL -0.9 -3.6 compare
nitrogen source NAG (N); with MOPS -0.9 -2.2 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.9 -3.3 compare
phage P. put South MOI 10 -0.9 -1.4 compare
nitrogen source D-2-Aminobutyric (N) -0.9 -1.8 compare
temperature Growth at 30C -0.9 -2.4 compare
nitrogen source Urea (N) -0.9 -1.4 compare
pH Growth at pH9 and (C) Trisodium citrate -0.9 -1.8 compare
nitrogen source no extra (N); with MOPS -0.8 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.9 +1.6 compare
phage P. putida Sci small MOI 0.1 +1.1 +3.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +2.9 compare