Fitness data for PP_3844 in Pseudomonas putida KT2440

putative D-aminopeptidase
SEED: D-aminopeptidase (EC 3.4.11.19)
KEGG: D-aminopeptidase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
temperature shift Temperature shift 30_to_25; with MOPS -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4 -2.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.4 compare
nitrogen source nitrate (N) -0.3 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.3 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.3 -1.8 compare
pH Growth at pH7 and (C) Trisodium citrate -0.3 -1.5 compare
stress Growth with Chloride 200 mM; with MOPS -0.3 -1.6 compare
stress R2A with Fusaric 240 ug/mL -0.3 -2.1 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.3 -2.1 compare
pH Growth at pH6 and (C) Trisodium citrate -0.3 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3 -1.6 compare
pH Growth at pH7 and (C) Trisodium citrate -0.3 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.5 compare
phage P. putida PUT 7 MOI 1 +0.4 +2.5 compare
phage P. putida Missley MOI 0.1 +0.4 +2.4 compare
phage P. putida Sci Big MOI 0.1 +0.5 +2.7 compare