Fitness data for PP_3816 in Pseudomonas putida KT2440

Polyamine ABC transporter, permease protein
SEED: polyamine ABC transporter, permease protein
KEGG: putative spermidine/putrescine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source D-2-Aminobutyric (N) -0.7 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6 -2.2 compare
nitrogen source nitrate (N) -0.6 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -2.2 compare
pH D-Glucose (C) pH 6.5 -0.5 -3.1 compare
nitrogen source Urea (N); with MOPS -0.5 -1.8 compare
phage P. putida Sci Big MOI 0.1 +0.5 +1.8 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.5 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5 +1.1 compare
phage P. putida Sci small MOI 0.1 +0.5 +2.1 compare
pH Growth at pH6 and (C) D-Glucose +0.5 +2.3 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.5 +2.1 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.5 +2.1 compare
pH pH 7 +0.6 +2.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +2.6 compare
pH Growth at pH7 and (C) D-Glucose +0.6 +2.1 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.7 +3.7 compare
carbon source Valeric (C) +0.7 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.1 compare