Fitness data for PP_3815 in Pseudomonas putida KT2440

Polyamine ABC transporter, permease protein
SEED: Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1)
KEGG: putative spermidine/putrescine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -0.8 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.6 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.2 compare
stress R2A with Fusaric 240 ug/mL -0.4 -1.7 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -1.2 compare
nitrogen source Propandiamine (N) -0.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.7 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.4 -2.0 compare
pH Growth at pH6 and (C) Trisodium citrate -0.4 -1.5 compare
carbon source 3-Hydroxydecanoic (C) -0.4 -1.7 compare
pH Growth at pH7 and (C) D-Glucose +0.4 +1.5 compare
pH Growth at pH9 and (C) Trisodium citrate +0.4 +1.8 compare
temperature Growth at 30C; with MOPS +0.5 +2.1 compare
temperature shift Temperature shift 10_to_34; with MOPS +0.5 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.7 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.6 +1.7 compare
carbon source Myristic (C) +0.7 +2.5 compare