Fitness data for PP_3814 in Pseudomonas putida KT2440

Polyamine ABC transporter, periplasmic polyamine-binding protein
SEED: ABC transporter, periplasmic spermidine putrescine-binding protein potD
KEGG: putative spermidine/putrescine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage P. putida Sci Big MOI 0.1 -1.7 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.5 -2.4 compare
nitrogen source nitrate (N) -1.3 -1.6 compare
stress Butanol 0.6 vol% -1.1 -3.8 compare
temperature shift Temperature shift 30_to_21; with MOPS -1.0 -1.9 compare
pH Growth at pH6 and (C) Trisodium citrate -0.9 -2.3 compare
carbon source 5-Hydroxydodecanoate (C) -0.9 -2.8 compare
carbon source ferulate (C); with MOPS -0.9 -1.8 compare
carbon source Nonanoic (C) -0.8 -1.9 compare
stress R2A with Fusaric 240 ug/mL -0.8 -1.7 compare
carbon source Glucose (C) (40mM) -0.8 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -2.5 compare
stress Growth with Chloride 200 mM; with MOPS -0.8 -1.9 compare
carbon source benzoic (C) -0.7 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.8 compare
carbon source D-Fructose (C) -0.7 -2.5 compare
carbon source acetate (C) +0.8 +2.4 compare
nitrogen source Hippuric (N) +0.9 +3.8 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +1.0 +1.8 compare