Fitness data for PP_3792 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Error-prone, lesion bypass DNA polymerase V (UmuC)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
nitrogen source Urea (N) -2.3 -2.8 compare
carbon source ferulate (C); with MOPS -2.0 -1.7 compare
pH Growth at pH9 and (C) Trisodium citrate -1.3 -2.2 compare
phage P. putida Sci small MOI 0.1 -1.3 -0.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1 -1.9 compare
stress Growth with Chloride 500 mM; with MOPS -1.1 -1.8 compare
carbon source L-Leucine (C) -1.1 -1.0 compare
nitrogen source Ammonium chloride (N) -1.0 -1.0 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -1.0 -1.4 compare
temperature Growth at 30C; with MOPS -1.0 -2.4 compare
phage P. putida PUT 7 MOI 1 -0.9 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9 -1.9 compare
stress Growth with Chloride 500 mM; with MOPS -0.9 -1.2 compare
temperature shift Temperature shift 30_to_34; with MOPS -0.8 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.8 -1.6 compare
carbon source D-Glucose (C); with MOPS +0.8 +1.9 compare
stress R2A with Fusaric 480 ug/mL +0.9 +3.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.9 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.2 +3.5 compare