Fitness data for PP_3778 in Pseudomonas putida KT2440

Pyrroline-5-carboxylate reductase
SEED: Pyrroline-5-carboxylate reductase (EC 1.5.1.2)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage PUT 8 MOI 1 -0.6 -1.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -2.0 compare
carbon source ferulate (C); with MOPS -0.6 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6 -1.6 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +2.5 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. +0.6 +3.4 compare
nitrogen source Glycine (N) +0.6 +4.4 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. +0.6 +3.6 compare
nitrogen source Hippuric (N) +0.6 +3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +1.8 compare
nitrogen source nitrogen source nitrite 1mM +0.6 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.5 compare
pH Growth at pH6 and (C) D-Glucose +0.6 +2.5 compare
carbon source ferulate (C); with MOPS +0.7 +2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.7 +3.0 compare
no stress control Growth with no stress +0.7 +2.4 compare
carbon source L-Glutamine (C) +0.7 +5.3 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.7 +4.5 compare
nitrogen source Hippuric (N) +0.8 +4.1 compare