Fitness data for PP_3774 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Alginate lyase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -1.0 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.0 -2.4 compare
nitrogen source Propandiamine (N) -0.8 -3.0 compare
phage P. putida Sci small MOI 0.1 -0.8 -2.5 compare
pH Growth at pH6 and (C) D-Glucose -0.8 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.0 compare
carbon source Crotonic (C) -0.7 -2.5 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.7 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.0 compare
carbon source Myristic (C) -0.7 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.7 compare
temperature shift Temperature shift 10_to_21; with MOPS -0.6 -1.7 compare
pH Growth at pH8 and (C) Trisodium citrate -0.6 -1.7 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.5 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.6 +1.7 compare
carbon source DL-3-Hydroxybutyric (C) +0.6 +2.5 compare
temperature Growth at 10C; with MOPS +0.6 +4.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.6 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +2.2 compare