Fitness data for PP_3738 in Pseudomonas putida KT2440

putative Transcriptional regulator VanR
SEED: Transcriptional regulator for ferulate or vanillate catabolism
KEGG: GntR family transcriptional regulator, vanillate catabolism transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
carbon source 1,3-Butandiol (C) -2.2 -2.6 compare
temperature shift Temperature shift 30_to_21; with MOPS -2.1 -2.2 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -1.6 -2.9 compare
nitrogen source nitrite (N) -1.5 -2.1 compare
carbon source D-Glucose (C) -1.4 -1.9 compare
pH Growth at pH6 and (C) Trisodium citrate -1.4 -2.4 compare
phage P. putida Missley MOI 0.1 -1.4 -2.2 compare
nitrogen source nitrate (N) -1.4 -2.4 compare
pH Growth at pH6 and (C) D-Glucose -1.4 -1.5 compare
carbon source Acetate Carbon Source (5mM) -1.3 -3.4 compare
stress Growth with Chloride 500 mM -1.2 -2.1 compare
temperature Growth at 25C; with MOPS -1.2 -1.9 compare
nitrogen source NAG (N); with MOPS -1.1 -1.0 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -1.1 -1.9 compare
phage P. putida Sci small MOI 0.1 -1.1 -1.2 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant +1.0 +1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.1 +2.3 compare
carbon source Protocatechuic Acid (C) +1.1 +3.1 compare
carbon source Protocatechuic Acid (C) +1.1 +4.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.8 +4.0 compare