Fitness data for PP_3716 in Pseudomonas putida KT2440

HTH-type transcriptional regulator
SEED: Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source benzoic (C) -6.0 -12.1 compare
carbon source benzoic (C) -5.6 -9.2 compare
carbon source benzoic (C) -2.8 -8.1 compare
nitrogen source Hippuric (N) -1.3 -5.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9 -2.2 compare
nitrogen source Hippuric (N) -0.8 -2.9 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -2.3 compare
stress R2A with Fusaric 240 ug/mL -0.7 -3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -3.2 compare
nitrogen source nitrogen source nitrite 1mM -0.7 -1.7 compare
phage P. putida PUT 7 MOI 1 -0.6 -1.6 compare
nitrogen source Urea (N) -0.6 -1.8 compare
nitrogen source nitrogen source nitrite 1mM -0.5 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.6 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.2 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.6 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +2.0 compare
pH pH 8 +0.7 +2.4 compare