Fitness data for PP_3708 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -2.5 compare
no stress control Growth with no stress -0.6 -2.4 compare
pH Growth at pH6 and (C) D-Glucose -0.6 -1.9 compare
temperature Growth at 10C; with MOPS -0.5 -2.9 compare
nitrogen source nitrate (N) -0.5 -2.0 compare
temperature Growth at 10C -0.5 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -1.8 compare
temperature Growth at 10C -0.4 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.2 compare
stress R2A with Fusaric 240 ug/mL +0.4 +2.2 compare
carbon source DL-2-Aminoadipic 10 mM (C) +0.4 +2.6 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.4 +2.2 compare
phage P. putida Sci Big MOI 0.1 +0.5 +2.1 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.5 +2.6 compare
pH Growth at pH6 and (C) Trisodium citrate +0.5 +2.6 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.5 +2.7 compare
phage PUT 8 MOI 1 +0.5 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.2 compare
phage P. putida Sci small MOI 0.1 +0.6 +2.6 compare