Fitness data for PP_3706 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
pH Growth at pH7 and (C) D-Glucose -0.5 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.5 -2.3 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -2.8 compare
carbon source D-Glucose (C) -0.4 -1.9 compare
carbon source D-Glucose (C); with MOPS -0.4 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.1 compare
nitrogen source Ammonium chloride (N) -0.4 -1.7 compare
nitrogen source Caprolactam (N) +0.3 +1.9 compare
nitrogen source nitrite (N) +0.4 +2.1 compare
temperature shift Temperature shift 30_to_34; with MOPS +0.4 +2.3 compare
phage P. putida Sci Big MOI 0.1 +0.4 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.6 compare
phage PUT8 MOI 0.1 +0.5 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +2.2 compare
nitrogen source 2,6-diaminopimelic (N) +0.5 +1.8 compare
phage PUT8 MOI 10 +0.5 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +3.1 compare
phage PUT8 MOI 10 +0.7 +3.3 compare
nitrogen source D-2-Aminobutyric (N) +0.7 +2.7 compare