Fitness data for PP_3684 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
nitrogen source nitrite (N) -1.1 -2.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.0 -3.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -2.6 compare
carbon source L-Phenylalanine 5 mM (C) -0.8 -2.7 compare
nitrogen source 2,6-diaminopimelic (N) -0.8 -1.8 compare
no stress control Growth with no stress -0.8 -2.0 compare
carbon source L-Phenylalanine 5 mM (C) -0.7 -2.6 compare
nitrogen source no extra (N); with MOPS -0.7 -2.0 compare
temperature Growth at 30C; with MOPS -0.6 -1.1 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.6 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.7 +2.1 compare
temperature shift Temperature shift 30_to_25 +0.7 +2.8 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.7 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.7 +0.8 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.7 +2.7 compare
phage P. putida Missley MOI 0.1 +0.8 +2.4 compare
carbon source ferulate (C); with MOPS +0.8 +2.0 compare
phage P. putida PUT 7 MOI 1 +1.0 +3.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 +5.1 compare
phage P. put South MOI 10 +1.4 +3.7 compare