Fitness data for PP_3682 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source 3-methyl-1-butanol 0.25 vol% (C) -1.2 -2.4 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -1.2 -2.4 compare
pH Growth at pH6 and (C) Trisodium citrate -1.0 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.0 -2.2 compare
nitrogen source Urea (N) -1.0 -1.6 compare
nitrogen source Ammonium chloride (N) -0.9 -1.6 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.9 -2.3 compare
nitrogen source D-2-Aminobutyric (N) -0.9 -1.7 compare
nitrogen source nitrogen source nitrite 1mM -0.9 -1.4 compare
carbon source 1,3-Butandiol (C) -0.9 -1.7 compare
temperature shift Temperature shift 10_to_30 -0.8 -2.0 compare
pH Growth at pH9 and (C) Trisodium citrate -0.8 -1.8 compare
temperature Growth at 10C; with MOPS -0.8 -3.8 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.8 -1.7 compare
phage P. putida Missley MOI 0.1 +0.8 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.8 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +2.7 compare
temperature shift Temperature shift 30_to_21; with MOPS +1.0 +3.6 compare
phage P. putida Sci small MOI 0.1 +1.1 +2.9 compare