Fitness data for PP_3656 in Pseudomonas putida KT2440

putative Aromatic compound-specific porin
SEED: Tricarboxylate porin OpdH

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source carbon source 3-O-methyl-glucose 10 mM -0.5 -3.2 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.4 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.4 compare
temperature shift Temperature shift 30_to_34; with MOPS -0.3 -2.0 compare
nitrogen source D-2-Aminobutyric (N) -0.3 -1.3 compare
carbon source 3-methyl-2-oxopentanoic (C) -0.3 -2.3 compare
pH pH 6 -0.3 -1.5 compare
temperature shift Temperature shift 10_to_21 -0.3 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.3 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.3 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.8 compare
carbon source Valerolactone (C) +0.3 +1.5 compare
phage P. putida PUT 7 MOI 1 +0.3 +1.8 compare
phage P. putida Sci small MOI 0.1 +0.3 +1.6 compare
carbon source Valeric (C) +0.3 +1.7 compare
phage P. putida Sci small MOI 0.1 +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.8 compare
carbon source Hexanoic (C) +0.7 +4.9 compare
carbon source Hexanoic (C) +0.7 +5.0 compare
carbon source Hexanoic (C) +1.5 +12.7 compare