Fitness data for PP_3640 in Pseudomonas putida KT2440

Transcriptional regulator, AraC family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -2.6 -2.6 compare
nitrogen source nitrogen source nitrite 1mM -1.8 -1.6 compare
carbon source Valerolactone (C) -1.3 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.2 -2.9 compare
stress R2A with Fusaric 480 ug/mL -1.2 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -1.7 compare
nitrogen source nitrogen source nitrate 5mM -1.0 -2.7 compare
carbon source Vanillin (C) -1.0 -3.4 compare
pH pH 8 -1.0 -1.4 compare
stress 3-methyl-3-butenol (commercial) 0.25 vol% -0.9 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -1.5 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose +0.9 +3.1 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.9 +2.1 compare
temperature shift Temperature shift 10_to_34; with MOPS +0.9 +2.8 compare
phage P. putida South MOI 10 +0.9 +2.4 compare
nitrogen source NAG (N); with MOPS +0.9 +1.4 compare
nitrogen source DL-2-Aminobutyric (N) +1.0 +3.5 compare
nitrogen source no extra (N); with MOPS +1.1 +3.6 compare
carbon source 1,3-Hexanediol (C) +1.2 +1.5 compare
nitrogen source D-2-Aminobutyric (N) +1.4 +2.4 compare