Fitness data for PP_3632 in Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -0.9 -1.9 compare
nitrogen source no extra (N); with MOPS -0.7 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7 -2.8 compare
pH Growth at pH8 and (C) D-Glucose -0.6 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -2.3 compare
carbon source 3-Hydroxydecanoic (C) -0.5 -2.0 compare
pH pH 7 +0.5 +2.2 compare
carbon source L-Lysine (C) +0.5 +2.4 compare
nitrogen source nitrogen source nitrate 5mM +0.5 +2.6 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.5 +2.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.2 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.6 +2.0 compare
carbon source carbon source Glycerol 108.6 mM +0.6 +2.5 compare
carbon source carbon source Bisabolene 48.9 mM +0.6 +2.5 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.6 +1.8 compare
pH pH 4 +0.7 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.0 compare
pH pH 5 +0.7 +2.7 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.8 +3.2 compare