Fitness data for PP_3625 in Pseudomonas putida KT2440

Transporter, LysE family
SEED: transporter, LysE family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage P. putida Sci Big MOI 0.1 -1.5 -1.7 compare
phage P. putida Sci small MOI 0.1 -1.5 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.4 -3.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.1 -1.3 compare
pH Growth at pH6 and (C) Trisodium citrate -1.0 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.0 -2.0 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.9 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -1.4 compare
stress Growth with Chloride 500 mM -0.9 -2.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -2.3 compare
carbon source L-Phenylalanine 5 mM (C) -0.8 -2.5 compare
stress 2-Piperidinone 3 vol% -0.8 -3.3 compare
temperature shift Temperature shift 30_to_4 -0.8 -2.0 compare
carbon source 4-Methyl-2-oxopentanoic (C) +0.8 +3.2 compare
carbon source 3-Hydroxydecanoic (C) +0.8 +2.4 compare
pH Growth at pH7 and (C) D-Glucose +0.8 +1.2 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.8 +1.9 compare
nitrogen source nitrate (N) +0.8 +2.6 compare
temperature shift Temperature shift 30_to_25 +0.9 +3.7 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +1.0 +4.0 compare