Fitness data for PP_3623 in Pseudomonas putida KT2440

vanillin dehydrogenase, cytochrome c component (from data)
Original annotation: Alcohol dehydrogenase cytochrome c subunit
SEED: Putative diheme cytochrome c-553

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Vanillin (C) -2.1 -9.7 compare
carbon source Vanillin (C) -2.0 -12.2 compare
carbon source Vanillin (C) -1.6 -7.9 compare
carbon source Vanillin (C) -1.5 -9.0 compare
carbon source 1,3-Hexanediol (C) -1.0 -6.2 compare
phage P. putida Sci small MOI 0.1 -0.8 -2.7 compare
carbon source 1,3-Hexanediol (C) -0.7 -4.6 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.5 -2.6 compare
phage P. putida Missley MOI 0.1 -0.5 -2.0 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.5 -2.2 compare
nitrogen source Urea (N) -0.5 -2.1 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.4 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.4 -1.5 compare
carbon source 1,5-Pentanediol (C) -0.4 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -1.6 compare
phage P. putida Sci Big MOI 0.1 -0.4 -1.6 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.3 -1.9 compare
phage PUT8 MOI 10 -0.3 -2.1 compare
carbon source propionate (C) -0.3 -2.1 compare
pH Growth at pH6 and (C) Trisodium citrate +0.3 +2.0 compare