Fitness data for PP_3610 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: DNA alkylation repair enzyme

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.8 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.8 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -2.0 compare
phage P. putida Sci small MOI 0.1 -0.7 -1.4 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.7 -2.0 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.6 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6 -2.0 compare
carbon source L-Phenylalanine 5 mM (C) -0.6 -2.3 compare
carbon source carbon source D-Glucose 55.5 mM -0.6 -1.9 compare
carbon source Protocatechuic Acid (C) -0.6 -2.6 compare
nitrogen source Betaine (N) -0.6 -3.1 compare
nitrogen source nitrogen source nitrate 5mM +0.6 +2.6 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.6 +1.6 compare
carbon source 3-Hydroxydecanoic (C) +0.6 +2.2 compare
carbon source 4-Methyl-2-oxopentanoic (C) +0.7 +2.2 compare
carbon source ferulate (C); with MOPS +0.7 +1.3 compare
pH Growth at pH9 and (C) Trisodium citrate +0.7 +1.9 compare
nitrogen source 2,6-diaminopimelic (N) +0.7 +1.7 compare
carbon source ferulate (C); with MOPS +0.8 +2.2 compare