Fitness data for PP_3609 in Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: Integral membrane protein
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -2.7 compare
nitrogen source 2,6-diaminopimelic (N) -0.6 -2.1 compare
nitrogen source D-2-Aminobutyric (N) -0.6 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5 -1.4 compare
pH pH 6 -0.5 -1.9 compare
stress MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL -0.5 -2.6 compare
nitrogen source Hippuric (N) -0.5 -2.4 compare
phage P. putida PUT10 MOI 1 -0.5 -2.6 compare
phage P. put South MOI 1 -0.5 -2.5 compare
nitrogen source L-pyroglutamic (N) -0.4 -2.8 compare
carbon source 4-Aminobutyric 10 mM (C) -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.3 compare
pH Growth at pH6 and (C) Trisodium citrate +0.4 +1.9 compare
micoeukaryotes C.elegans, mixed culture-2 +0.5 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.5 +2.0 compare
temperature shift Temperature shift 10_to_21; with MOPS +0.5 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.7 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.6 +3.0 compare