Fitness data for PP_3608 in Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
phage P. putida Sci small MOI 0.1 -0.7 -1.6 compare
phage P. putida South MOI 10 -0.6 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -1.9 compare
nitrogen source nitrogen source nitrite 0.5mM -0.6 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.4 compare
micoeukaryotes C.elegans, mixed culture-2 -0.5 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.3 compare
pH Growth at pH9 and (C) D-Glucose +0.5 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5 +1.7 compare
pH pH 6 +0.5 +2.1 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.5 +1.8 compare
carbon source Octanoic (C) +0.5 +3.0 compare
pH Growth at pH8 and (C) D-Glucose +0.5 +2.8 compare
nitrogen source 2,6-diaminopimelic (N) +0.5 +1.9 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.5 +2.0 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.6 +2.7 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.6 +2.3 compare
carbon source Trisodium citrate (C) +0.6 +2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +2.1 compare