Fitness data for PP_3596 in Pseudomonas putida KT2440

D-lysine oxidase
SEED: D-amino acid dehydrogenase small subunit (EC 1.4.99.1)
KEGG: D-amino-acid dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
carbon source L-Lysine (C) -6.5 -8.9 compare
nitrogen source D-Lysine (N) -5.9 -11.3 compare
carbon source L-Lysine (C) -5.6 -10.1 compare
nitrogen source D-Lysine (N) -5.4 -11.0 compare
carbon source L-Lysine (C) -5.3 -8.9 compare
carbon source D-Lysine 10 mM (C) -3.9 -7.6 compare
carbon source D-Lysine 10 mM (C) -3.7 -7.8 compare
carbon source L-Lysine 10 mM (C) -3.0 -6.1 compare
nitrogen source D-2-Aminobutyric (N) -2.6 -5.8 compare
nitrogen source D-2-Aminobutyric (N) -2.5 -4.8 compare
nitrogen source L-Lysine (N) -2.5 -11.0 compare
nitrogen source L-Lysine (N) -2.4 -10.6 compare
nitrogen source L-Leucine (N) -2.2 -5.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.8 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.7 -6.1 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -1.7 -6.0 compare
micoeukaryotes C.elegans, mixed culture-1 -1.6 -5.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.6 -2.8 compare
pH Growth at pH8 and (C) D-Glucose -1.5 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.5 -3.8 compare