Fitness data for PP_3595 in Pseudomonas putida KT2440

L-lysine and D-lysine ABC transporter, permease component 2 (from data)
Original annotation: Amino acid ABC transporter, membrane protein
SEED: Amino acid ABC transporter, permease protein
KEGG: polar amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source L-Lysine (C) -6.2 -11.1 compare
carbon source D-Lysine 10 mM (C) -5.0 -11.1 compare
nitrogen source D-Lysine (N) -5.0 -12.1 compare
nitrogen source D-Lysine (N) -4.7 -13.4 compare
carbon source D-Lysine 10 mM (C) -4.0 -7.8 compare
carbon source L-Lysine (C) -3.7 -5.6 compare
carbon source L-Lysine (C) -3.6 -8.9 compare
carbon source L-Lysine 10 mM (C) -3.5 -8.2 compare
nitrogen source L-Lysine (N) -2.3 -12.4 compare
nitrogen source L-Lysine (N) -2.1 -10.3 compare
nitrogen source L-Ornithine (N) -0.8 -5.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.8 -2.2 compare
nitrogen source L-Ornithine (N) -0.7 -5.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.7 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -2.3 compare
phage P. putida Missley MOI 0.1 -0.6 -1.7 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.6 +2.3 compare
stress Geraniol 1 vol% +0.7 +3.3 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.7 +2.6 compare
nitrogen source L-Pipecolic Acid (N) +0.7 +3.5 compare