Fitness data for PP_3584 in Pseudomonas putida KT2440

multidrug efflux transport system - membrane subunit
SEED: Acriflavin resistance plasma membrane protein
KEGG: RND superfamily, multidrug transport protein MdtB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source 3-methyl-3-buten-1-ol 0.1 vol% (C) -0.8 -6.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -3.7 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -4.3 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.6 -3.0 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -3.3 compare
phage P. putida Sci Big MOI 0.1 -0.5 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5 -2.4 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -3.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -2.3 compare
stress R2A with Fusaric 480 ug/mL -0.4 -2.6 compare
phage P. putida PUT10 MOI 10 -0.4 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.9 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.4 -2.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.4 -1.9 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.4 -2.3 compare
pH Growth at pH9 and (C) Trisodium citrate +0.4 +2.0 compare
pH Growth at pH7 and (C) Trisodium citrate +0.4 +1.9 compare
pH Growth at pH9 and (C) Trisodium citrate +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.1 compare