Fitness data for PP_3579 in Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: Probable transmembrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.4 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.0 -1.9 compare
carbon source acetate (C) -0.9 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -2.8 compare
nitrogen source nitrogen source nitrite 0.5mM -0.7 -2.0 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.7 -1.9 compare
pH pH 8 -0.7 -2.1 compare
nitrogen source Hydantoin (N) -0.7 -2.9 compare
nitrogen source Propandiamine (N) -0.6 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.1 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.6 -2.3 compare
nitrogen source Imidazole (N) -0.6 -2.4 compare
nitrogen source L-Lysine (N) -0.6 -2.8 compare
carbon source L-Leucine (C) +0.6 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.1 compare
stress pinene 10 vol% +0.7 +3.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.7 +2.0 compare