Fitness data for PP_3577 in Pseudomonas putida KT2440

RNA polymerase, sigma 19 factor
SEED: RNA polymerase sigma-70 factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
carbon source Tween 20 (C) -0.9 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6 -2.4 compare
carbon source L-Lysine (C) -0.6 -1.8 compare
carbon source Valeric (C) -0.5 -1.8 compare
temperature Growth at 30C; with MOPS -0.5 -1.5 compare
stress Growth with Chloride 500 mM; with MOPS -0.5 -1.6 compare
nitrogen source no extra (N); with MOPS -0.5 -2.0 compare
phage P. putida PUT10 MOI 10 -0.5 -2.8 compare
carbon source Hexanoic (C) -0.5 -2.6 compare
carbon source carbon source Bisabolol 45 mM +0.5 +1.6 compare
nitrogen source nitrogen source nitrite 0.5mM +0.5 +2.1 compare
carbon source D-Glucose (C) +0.5 +2.0 compare
temperature Growth at 25C +0.5 +1.6 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM +0.5 +1.5 compare
pH pH 5 +0.5 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.2 compare
carbon source carbon source Glycerol 108.6 mM +0.5 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +0.9 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.7 +2.1 compare