Fitness data for PP_3576 in Pseudomonas putida KT2440

putative Transmembrane sensor
SEED: Iron siderophore sensor protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.002 mg/ml -2.0 -2.5 compare
phage P. putida PUT 7 MOI 1 -1.4 -2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -3.3 compare
nitrogen source D-2-Aminobutyric (N) -1.0 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -2.5 compare
carbon source ferulate (C); with MOPS -0.9 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.6 compare
pH Growth at pH6 and (C) D-Glucose -0.9 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.9 -2.5 compare
phage P. putida Sci small MOI 0.1 -0.9 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.8 -1.6 compare
phage PUT 8 MOI 1 -0.8 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -1.5 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -0.7 -2.0 compare
nitrogen source Ammonium chloride (N) -0.7 -1.5 compare
lb LB -0.7 -3.2 compare
stress R2A with Fusaric 480 ug/mL -0.7 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.6 compare
phage P. putida Sci Big MOI 0.1 +1.3 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.9 +1.5 compare