Fitness data for PP_3574 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.5 -3.2 compare
nitrogen source nitrite (N) -1.0 -2.3 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.9 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.0 compare
carbon source D-Glucose (C); with MOPS -0.6 -2.4 compare
pH pH 4 -0.6 -1.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.9 compare
phage P. put South MOI 10 -0.6 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6 -1.5 compare
carbon source 4-Hydroxyvalerate (C) (40mM) -0.5 -2.1 compare
temperature Growth at 30C -0.5 -1.6 compare
carbon source D-Glucose (C) +0.5 +1.2 compare
phage P. putida Missley MOI 0.1 +0.5 +1.6 compare
pH Growth at pH6 and (C) D-Glucose +0.6 +1.9 compare
pH Growth at pH6 and (C) Trisodium citrate +0.6 +2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +1.6 compare
carbon source D-Glucose (C) +0.6 +1.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.6 +2.2 compare
temperature shift Temperature shift 10_to_25 +0.6 +3.0 compare
pH Growth at pH7 and (C) Trisodium citrate +0.8 +2.5 compare