Fitness data for PP_3560 in Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)

group	condition	fitness	t score
pH	Growth at pH6 and (C) D-Glucose	-1.3	-2.6	compare
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-1.2	-2.0	compare
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.9	-3.3	compare
nitrogen source	no extra (N); with MOPS	-0.9	-2.5	compare
nitrogen source	NAG (N); with MOPS	-0.8	-0.9	compare
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.8	-2.1	compare
carbon source	carbon source 4-vinylphenol 0.1 mM	-0.8	-2.2	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-0.8	-3.5	compare
carbon source	ferulate (C); with MOPS	-0.8	-1.6	compare
pH	Growth at pH9 and (C) Trisodium citrate	-0.8	-1.3	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.8	-2.5	compare
carbon source	butyrate (C)	-0.8	-1.5	compare
temperature shift	Temperature shift 10_to_34; with MOPS	-0.7	-2.8	compare
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-0.7	-2.1	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-0.7	-2.1	compare
carbon source	benzoic (C)	-0.6	-2.3	compare
nitrogen source	nitrate (N)	+0.6	+1.8	compare
carbon source	D-Glucose (C)	+0.7	+1.9	compare
pH	Valerolactone (C) pH 6.5	+0.8	+2.2	compare
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9	+1.4	compare